MRI Visualization of Whole Brain Macro- and Microvascular Remodeling in a Rat Model of Ischemic Stroke: A Pilot Study

Using superparamagnetic iron oxide nanoparticles (SPION) as a single contrast agent, we investigated dual contrast cerebrovascular magnetic resonance imaging (MRI) for simultaneously monitoring macro- and microvasculature and their association with ischemic edema status (via apparent diffusion coefficient [ADC]) in transient middle cerebral artery occlusion (tMCAO) rat models. High-resolution T1-contrast based ultra-short echo time MR angiography (UTE-MRA) visualized size remodeling of pial arteries and veins whose mutual association with cortical ischemic edema status is rarely reported. ??R2?????R2*-MRI-derived vessel size index (VSI) and density indices (Q and MVD) mapped morphological changes of microvessels occurring in subcortical ischemic edema lesions. In cortical ischemic edema lesions, significantly dilated pial veins (p???=???0.0051) and thinned pial arteries (p???=???0.0096) of ipsilateral brains compared to those of contralateral brains were observed from UTE-MRAs. In subcortical regions, ischemic edema lesions had a significantly decreased Q and MVD values (p???<???0.001), as well as increased VSI values (p???<???0.001) than normal subcortical tissues in contralateral brains. This pilot study suggests that MR-based morphological vessel changes, including but not limited to venous blood vessels, are directly related to corresponding tissue edema status in ischemic stroke rat models

NMR measurement of the magnetic field correlation function in porous media

The structure factor provides a fundamental characterization of porous and granular materials as it is the key for solid crystals via measurements of x-ray and neutron scattering. Here, we demonstrate that the structure factor of the granular and porous media can be approximated by the pair correlation function of the inhomogeneous internal magnetic field, which arises from the susceptibility difference between the pore filling liquid and the solid matrix. In-depth understanding of the internal field is likely to contribute to further development of techniques to study porous and granular media.open9

Decay of highly-correlated spin states in a dipolar-coupled solid

We have measured the decay of NMR multiple quantum coherence intensities both under the internal dipolar Hamiltonian as well as when this interaction is effectively averaged to zero, in the cubic calcium fluoride (CaF2) spin system and the pseudo one-dimensional system of fluoroapatite. In calcium fluoride the decay rates depend both on the number of correlated spins in the cluster, as well as on the coherence number. For smaller clusters, the decays depend strongly on coherence number, but this dependence weakens as the size of the cluster increases. The same scaling was observed when the coherence distribution was measured in both the usual Zeeman or z basis and the x basis. The coherence decay in the one dimensional fluoroapatite system did not change significantly as a function of the multiple quantum growth time, in contrast to the calcium fluoride case. While the growth of coherence orders is severely restricted in this case, the number of correlated spins should continue to grow, albeit more slowly. All coherence intensities were observed to decay as Gaussian functions in time. In all cases the standard deviation of the observed decay appeared to scale linearly with coherence number.Comment: 7 pages, 9 figures. submitted to PR

Decay of highly correlated spin states in a dipolar-coupled solid: NMR study of CaF2

We have measured the decay of NMR multiple quantum coherence intensities both under the internal dipolar Hamiltonian as well as when this interaction is effectively averaged to zero, in the cubic calcium fluoride (CaF2) spin system and the pseudo-one-dimensional system of fluoroapatite. In calcium fluoride the decay rates depend both on the number of correlated spins in the cluster, as well as on the coherence number. For smaller clusters, the decays depend strongly on coherence number, but this dependence weakens as the size of the cluster increases. The same scaling was observed when the coherence distribution was measured in both the usual Zeeman or z basis and the x basis. The coherence decay in the one-dimensional fluoroapatite system did not change significantly as a function of the multiple quantum growth time, in contrast to the calcium fluoride case. While the growth of coherence orders is severely restricted in this case, the number of correlated spins should continue to grow, albeit more slowly. All coherence intensities were observed to decay as Gaussian functions in time. In all cases the standard deviation of the observed decay appeared to scale linearly with coherence number.open182

Cerebral blood perfusion deficits using dynamic susceptibility contrast MRI with gadolinium chelates in rats with post-ischemic reperfusion without significant dynamic contrast-enhanced MRI-derived vessel permeabilities: A cautionary note

In this study, we quantified perfusion deficits using dynamic susceptibility contrast magnetic resonance imaging (DSC-MRI) with an extravasating contrast agent (CA). We also investigated the efficacy of leakage compensation from CA pre-load in brains from post-ischemic rat models without significant dynamic contrast-enhanced MRI (DCE-MRI)-derived vessel wall permeability. DSC measurements were obtained using fast (0.3 s) echo-planar imaging in both normal rats and rats with transient middle carotid artery occlusion (MCAO) (1-h MCAO, 24-h reperfusion) after successive administrations of gadoterate meglumine (Dotarem) and intravascular superparamagnetic iron oxide nanoparticles (SPION). The relative cerebral blood volume (CBV) and cerebral blood flow (CBF) values acquired using Dotarem were significantly underestimated (~20%) when compared to those acquired using SPION in ipsilesional post-ischemic brain regions. A slight overestimation of relative mean transit time was observed. Areas with underestimated CBV and CBF values from the corresponding error maps encompassed the area of infarcted tissue (apparent diffusion coefficient < 500 ??m2/s) and mostly coincided with the area wherein conspicuous longitudinal relaxation time differences were observed pre- vs. post-injection of Dotarem. The DSC measurements with significant pre-load (0.3 mmol??kg-1) of Dotarem displayed minimal perfusion deficits when compared to those determined using the reference intravascular SPION

Observation of trapped-modes excited in double-layered symmetric electric ring resonators

We report on experimental observations of trapped-mode resonances in double-layered symmetric electric ring resonators separated by dielectric inserts. The resulting metamaterial introduces trapped-mode resonances that were thought to be produced only by asymmetric metamaterial unit cells. Experimental verification of the newly observed trapped modes, along with the analysis of the stacked metamaterial geometry reported in this paper, opens an alternative way of forming sharp resonances in a symmetric metamaterial structure extended in all three dimensions.open9

Exploring large coherent spin systems with solid state NMR

Thesis (Ph. D.)--Massachusetts Institute of Technology, Dept. of Nuclear Engineering, 2005.Includes bibliographical references (p. 119-124).Solid state Nuclear Magnetic Resonance (NMR) allows us to explore a large coherent spin system and provides an ideal test-bed for studying strongly interacting multiple-spin system in a large Hilbert space. In this thesis, we experimentally investigate the spin dynamics in a rigid lattice of dipolarly coupled nuclear spins using multiple quantum NMR spectroscopy. Encoding multiple quantum coherences (MQC) in an arbitrary quantizing axis is developed. We utilized this method to encode coherence numbers in an orthogonal basis to Zeeman basis and showed that the dipolar-ordered state is a two spin correlated state, and confirmed the presence of the ... (flip-flop) terms in the experimentally prepared dipolar-ordered state. A new experimental investigation of the problem of the NM:R free induction decay (FID) in a lattice of spin 1/2 nuclei is presented to verify the multi-spin nature of the FID and the dominant role of the geometrical arrangement of the spins in the development of higher order correlations under the dipolar evolution. To study the dynamics and the controllability of these multiple spin correlations, effective decay times of individual coherence orders are measured under the dipolar interaction and under the control sequence that suppresses the dipolar evolution.(cont.) It is seen that the decay time of each coherence order becomes shorter and more uniform among different coherence orders as the spin correlation size grows larger in both cases. Additional work has been done in this thesis, toward creating a pure state in solid state nuclear spins by transferring polarization from electron spins, i.e Dynamic Nuclear Polarization (DNP). A new cryogenic DNP probe was developed enabling multiple pulse irradiations at low temperature with enhanced polarization.by HyungJoon Cho.Ph.D

Improved laminar specificity and sensitivity by combining SE and GE BOLD signals

The most widely used gradient-echo (GE) blood oxygenation level-dependent (BOLD) contrast has high sensitivity, but low specificity due to draining vein contributions, while spin-echo (SE) BOLD approach at ultra-high magnetic fields is highly specific to neural active sites but has lower sensitivity. To obtain high specificity and sensitivity, we propose to utilize a vessel-size-sensitive filter to the GE-BOLD signal, which suppresses macrovascular contributions and to combine selectively retained microvascular GE-BOLD signals with the SE-BOLD signals. To investigate our proposed idea, fMRI with 0.8 mm isotropic resolution was performed on the primary motor and sensory cortices in humans at 7 T by implementing spin- and gradient-echo (SAGE) echo planar imaging (EPI) acquisition. Microvascular-passed sigmoidal filters were designed based upon the vessel-size-sensitive ??R2*/??R2 value for retaining GE-BOLD signals originating from venous vessels with ??? 45 ??m and ??? 65 ??m diameter. Unlike GE-BOLD fMRI, the laminar profile of SAGE-BOLD fMRI with the vessel-size-sensitive filter peaked at ??? 1.0 mm from the surface of the primary motor and sensory cortices, demonstrating an improvement of laminar specificity over GE-BOLD fMRI. Also, the functional sensitivity of SAGE BOLD at middle layers (0.75???1.5 mm) was improved by ??? 80% to ???100% when compared with SE BOLD. In summary, we showed that combined GE- and SE-BOLD fMRI with the vessel-size-sensitive filter indeed yielded improved laminar specificity and sensitivity and is therefore an excellent tool for high spatial resolution ultra-high filed (UHF)-fMRI studies for resolving mesoscopic functional units

Influence of B1 Inhomogeneity on Pharmacokinetic Modeling of Dynamic Contrast-Enhanced MRI: A Simulation Study

Objective: To simulate the B1-inhomogeneity-induced variation of pharmacokinetic parameters on DCE-MRI. Materials and Methods: B1-inhomogeneity-induced flip angle (FA) variation was estimated in a phantom study. Monte Carlo simulation was performed to assess the FA-deviation-induced measurement error of the pre-contrast R1, contrast-enhancement ratio, Gd concentration, and two-compartment pharmacokinetic parameters (Ktrans, ve and vp). Results: B1-inhomogeneity resulted in -23% ~ 5% fluctuations (95% confidence interval (CI) of % error) of FA. The 95% CIs of FA-dependent % errors in the gray matter and blood were as follows: -16.7% - 61.8% and -16.7% - 61.8% for the pre-contrast R1, -1.0% - 0.3% and -5.2% - 1.3% for the contrast-enhancement ratio, and -14.2% - 58.1% and -14.1% - 57.8% for the Gd concentration, respectively. These resulted in -43.1% - 48.4% error for Ktrans, -32.3% - 48.6% error for the ve, and -43.2% - 48.6% error for vp. The pre-contrast R1 was more vulnerable to FA error than the contrast-enhancement ratio, and was therefore a significant cause of the Gd-concentration error. For example, a -10% FA error led to a 23.6% deviation in the pre-contrast R1, -0.4% in the contrast-enhancement ratio, and 23.6% in the Gd concentration. In a simulated condition with a 3% FA error in a target lesion and a -10% FA error in a feeding vessel, the % errors of the pharmacokinetic parameters were -23.7% for Ktrans, -23.7% for ve, and -23.7% for vp. Conclusion: Even a small degree of B1-inhomogeneity can cause a significant error in the measurement of pharmacokinetic parameters on DCE-MRI, while the vulnerability of the pre-contrast R1 calculations to FA deviations is a significant cause of the miscalculation.ope

Response of the primary auditory and non-auditory cortices to acoustic stimulation: A manganese-enhanced MRI study

Structural and functional features of various cerebral cortices have been extensively explored in neuroscience research. We used manganese-enhanced MRI, a non-invasive method for examining stimulus-dependent activity in the whole brain, to investigate the activity in the layers of primary cortices and sensory, such as auditory and olfactory, pathways under acoustic stimulation. Male Sprague-Dawley rats, either with or without exposure to auditory stimulation, were scanned before and 24-29 hour after systemic MnCl2 injection. Cortex linearization and layer-dependent signal extraction were subsequently performed for detecting layer-specific cortical activity. We found stimulus-dependent activity in the deep layers of the primary auditory cortex and the auditory pathways. The primary sensory and visual cortices also showed the enhanced activity, whereas the olfactory pathways did not. Further, we performed correlation analysis of the signal intensity ratios among different layers of each cortex, and compared the strength of correlations between with and without the auditory stimulation. In the primary auditory cortex, the correlation strength between left and right hemisphere showed a slight but not significant increase with the acoustic simulation, whereas, in the primary sensory and visual cortex, the correlation coefficients were significantly smaller. These results suggest the possibility that even though the primary auditory, sensory, and visual cortices showed enhanced activity to the auditory stimulation, these cortices had different associations for auditory processing in the brain network.open0